Monday, May 27, 2024

How to Use AWS Glue and Athena for Pipeline Development

 

Introduction to AWS Glue and Athena

AWS Glue and Athena are two services offered by Amazon Web Services (AWS) that play important roles in pipeline development. AWS Glue is an extract, transform, and load (ETL) service that helps streamline the process of preparing and loading data from various sources for analysis. It offers a fully managed, serverless, and scalable solution for handling batch or streaming data. Glue uses a combination of Apache Spark and Python to perform data transformation tasks and creates ETL jobs that can be scheduled and run automatically. It also provides a centralized data catalog that allows users to store and manage metadata for different datasets, making it easier to discover and query data.

Setting up the AWS Environment

Step 1: Create an AWS Account

  • Go to the AWS homepage at https://aws.amazon.com/ and click on the “Create an AWS Account” button in the upper-right corner.

  • On the next page, choose “Create a new AWS account” and enter your email address. Click “Continue”.

  • Enter your personal details, including your name, address, and phone number. Click “Create Account and Continue”.

  • Enter your credit card information for billing purposes. Don’t worry, there is a free usage tier for many AWS services, and you will only be charged if you exceed it. Click “Verify and Add”.

  • You will receive an email with a confirmation link. Click on the link to verify your email address.

  • Follow the instructions to set up a new password for your AWS account.

Step 2: Create an S3 Bucket for Storing Data and Scripts

  • Log in to your AWS account at https://aws.amazon.com/ with your email and new password.

  • In the top navigation bar, click on “Services” and select “S3” under “Storage”.

  • Click on the “Create bucket” button in the upper-right corner.

  • Give your bucket a unique name. Make sure to choose a region that is closest to you for better performance.

  • Leave all other settings as default and click “Create”.

Step 3: Set Up required IAM Roles and Permissions for Glue and Athena

  • In the top navigation bar, click on “Services” and select “IAM” under “Security, Identity, & Compliance”.

  • Click on the “Roles” tab on the left-hand side and then click on the “Create role” button.

  • Under “Choose the service that will use this role”, select “Glue” and click “Next: Permissions”.

  • Click on “AWSGlueServiceRole” and click “Next: Tags”.

  • Click “Next: Review”.

  • Give your role a name, such as “AWSGlueServiceRole”, and click “Create role”.

  • Repeat the steps 2–6, but this time choose “Athena” instead of “Glue” in step 3.

  • Your IAM roles are now created and you can use them for Glue and Athena.

Understanding AWS Glue

Glue is a fully managed extract, transform, and load (ETL) service from Amazon Web Services (AWS) designed to help users prepare and load data for analytics. It is a serverless service that allows users to build and run ETL jobs at scale without worrying about infrastructure management.

The key components of Glue are Crawler, Data Catalog, and ETL jobs.

  • Crawler: Crawler helps automate the process of discovering and cataloging data stored in various data repositories such as AWS S3, relational databases, and NoSQL databases. It is a fully managed service that runs periodically to scan the data sources and catalog the metadata of the discovered data. Crawlers can infer file types, schema, and data formats, making it easier to work with unstructured or semi-structured data.

  • Data Catalog: A Data Catalog is a central metadata repository that stores information about the data sources, schemas, and transformations. The Data Catalog is the heart of Glue, and all the components of Glue interact with it. It provides a unified view of data across data sources and enables discovery, query, and access to the data.

  • ETL jobs: ETL (Extract, Transform, Load) jobs are the core functionality of Glue. It allows users to transform and move data between different data sources. It provides a visual interface for users to create and configure ETL jobs without writing any code. Users can choose from a wide range of built-in transforms, such as filtering, projecting, and aggregating, to transform their data. ETL jobs run on a serverless Apache Spark cluster, ensuring high scalability and parallelism.



Now, let’s dive into each component in detail and understand how to utilize them for discovering and cataloging data and how to create and configure ETL jobs in Glue

  • Crawler: Crawler is the first step in the ETL process. It automates the process of discovering and cataloging data. It supports various data sources, including Amazon S3, JDBC-compatible databases (such as MySQL or PostgreSQL), Amazon Aurora, Amazon Redshift, and non-JDBC sources such as Apache Hive Metastore, and MongoDB. The crawler saves the metadata of the discovered data in the Data Catalog. To use Crawler, you need to create a crawler by providing the data source and the output data store location. You can also specify the frequency at which the crawler should run and an optional schedule for the crawler. Once the crawler completes its scan, it creates a database and tables in the Data Catalog for each discovered data source.

  • Data Catalog: A Data Catalog is a central repository for storing and managing the metadata of your data. It stores information such as databases, tables, columns, and partitions, making it easier to search and access your data. The Data Catalog also supports users to add and edit metadata, making it easier to query and identify your data. To use the Data Catalog, first, you need to enable it in the AWS console. Then, you can start adding metadata to your data sources, including descriptions, classifications, and comments. You can also tag your data for better organization and search.

  • ETL jobs: ETL jobs are the core functionality of Glue. It allows users to transform and move data between different data sources. To create an ETL job, you need to specify a source and target data source and add transformation logic using built-in transforms or custom scripts. You can also choose the type and size of the Spark cluster that will run the job, based on your data size and complexity.

After the ETL job is complete, you can monitor its progress and view the log files to troubleshoot any errors. You can also schedule ETL jobs to run periodically, allowing users to automate the data pipeline process.

Building a Data Catalog with Glue

A data catalog is a centralized repository that stores metadata, or information about a set of data, making it easier for users to discover, understand, and access the data. In this guide, we will be using AWS Glue, a fully managed ETL (extract, transform, load) service, to create a data catalog. We will walk you through the steps of how to define data schema and manage metadata, and then show you how to use the Glue Data Catalog in conjunction with Athena, a serverless, interactive query service. By the end of this guide, you will have a fully functional data catalog that can be used to easily access and analyze your data.

Step 1: Set up your AWS environment To get started, you will need an AWS account. Once you have an account, navigate to the AWS Glue console and click on the “Get started” button. This will create a new AWS Glue service in your account.

Step 2: Create a database in Glue Data Catalog Before we can start defining our data schema, we need to create a database in the Glue Data Catalog. A database is a logical grouping of tables that contain related data. To create a database, click on the “Databases” tab in the Glue console and then click on the “Add database” button. Give your database a name and click “Create.”

Step 3: Define data schema Defining a data schema involves specifying the structure of your data, such as column names, data types, and more. This is important because it allows the Glue Data Catalog to understand the structure of your data and make it easier to query and analyze.

To define a data schema, click on the “Tables” tab in the Glue console and then click on the “Add tables” button. Choose the database you created in the previous step and give your table a name. You will then be prompted to specify your data source. This could be a file in Amazon S3, an Amazon Redshift cluster, or other supported data sources. For this guide, we will be using an S3 file. Once you have selected your data source, Glue will automatically infer the data schema for you. You can make any necessary changes to the schema, such as renaming columns or changing data types. Once you are satisfied with your schema, click “Save.”

Step 4: Manage metadata Now that we have defined our data schema, we can add additional metadata to our tables to make them more useful. This metadata can include descriptions, tags, and data classifications. To add metadata, click on the table you created in the previous step and then click on the “Edit table” button. Under the “General properties” section, you can add a description and tags. You can also define data classifications under the “Data classification” section. Once you have added all the desired metadata, click “Save."

Step 5: Use Glue Data Catalog with Athena Now that we have created our data catalog and defined our data schema, we can use it with Athena to query and analyze our data. Athena allows you to run SQL queries against data stored in Amazon S3 without the need to set up any infrastructure. To get started, go to the Athena console and create a new table by selecting the database and table you created in the previous steps. Once you have selected your table, you can start querying your data using standard SQL syntax.

Step 6: Automate data catalog updates using Crawlers One of the benefits of using Glue Data Catalog is the ability to automatically update the metadata and schema of your tables. Glue Crawlers can be used to automatically crawl your data sources, infer the schema, and update the Glue Data Catalog. To set up a crawler, go to the Glue console and click on the “Crawlers” tab. Click “Add crawler” and follow the prompts to configure the crawler. You can schedule crawlers to run at specific intervals to ensure that your data catalog is always up-to-date.

Running ETL Jobs with Glue

Creating and Running ETL Jobs in Glue:

Step 1: Create a Glue Job

  • Login to your AWS console and navigate to the Glue service.

  • Click on “Jobs” from the left navigation menu and then click on “Add Job”.

  • Give the job a name and select the IAM role that has permission to access your data sources and targets.

  • In the “Choose a data source” section, select the source type (S3, JDBC, or DynamoDB) and provide the required information.

  • In the “Choose a data target” section, select the target type (S3 or JDBC) and provide the required information.

  • Under the “Job parameters” section, you can specify additional parameters such as job timeout, data partitions, etc.

  • Click on “Next” to proceed to the next step.

Step 2: Add Glue ETL Scripts

  • Under the “Job Script” section, click on the “Edit script” button to open the Glue ETL editor.

  • In the editor, you can write your transformation logic using AWS Glue’s built-in transforms or custom scripts.

  • Glue provides a drag-and-drop interactive interface to create ETL workflows.

  • You can add data mapping between source and target columns, apply filters, and aggregations and join multiple data sources.

  • Once you have completed your ETL transformations, click on “Save” to save the script.

Step 3: Configure Job Triggers

  • On the “Job Details” page, under the “Schedule” section, you can configure triggers for your job.

  • You can choose to run the job on a schedule, or on-demand by clicking on the “Run job” button.

  • Click on “Next” to proceed.

Step 4: Review and Run the Job

  • On the “Review job” page, review the job settings and click on “Save job and edit script” to make any further changes.

  • Once you are satisfied with the job settings, click on “Save job and edit script” to run the job.

  • The job will start running and you can monitor its progress on the “Jobs” page.

Example of Transforming Data using Glue’s Built-in Transformations:

Scenario: We have a CSV file in S3 bucket containing product information with the following columns: product_id, name, price, category.

  • In the Glue ETL editor, add a new data source by clicking on the “+Source” button on the left panel.

  • Select “Data catalog” as the source type and choose the CSV file from the S3 bucket.

  • Add a mapping between the source columns and the target columns by clicking on the “Add mapping” button.

  • Drag and drop the built-in transformation “uppercase” onto the “name” column.

  • This will transform all the names into uppercase letters.

  • To apply a filter, add a “filter” transformation and specify the condition as “price > 50”.

  • This will filter out all the products with prices less than or equal to 50.

  • Finally, add the “category” column as a partition to the output table.

  • Save the script and run the job.

Monitoring and Troubleshooting Glue Jobs:

  • Glue provides a real-time job run dashboard where you can monitor the progress, status, duration, and errors of your job.

  • You can also view the job logs to troubleshoot any errors or issues.

  • In case of errors, you can use the “Data quality” feature which automatically detects data quality issues and suggests recommended fixes.

  • You can also use AWS CloudWatch for automated monitoring and logging of Glue jobs.

  • To troubleshoot any errors, you can enable debug logging for your job, which will provide detailed information about the execution steps.

  • If your job is stuck or taking longer than expected, you can use the “Kill job run” option to stop the job.

Introduction to AWS Athena

AWS Athena is a serverless query service that allows users to analyze data stored in Amazon S3 using standard SQL queries. It is designed for quick and easy data analysis, without the need for any infrastructure management or administration.

Athena complements AWS Glue, a fully managed ETL (extract, transform, and load) service. Glue is used for data processing and preparation, such as data cleansing, deduplication, and format conversion, before loading it into a data warehouse or database. On the other hand, Athena is focused on data analysis and allows querying data directly from S3 without any prior data preparation.

The main advantage of using Athena is its ease of use. Since it is a serverless service, users do not have to worry about managing servers, storage, or any infrastructure-related tasks. It also does not require any data loading or transformation before querying, reducing the overall time and effort needed for data analysis.

Another advantage of using Athena is its cost-effectiveness. It follows a pay-per-query pricing model, where users only pay for the queries they run, making it more affordable for smaller workloads. Additionally, since Athena is integrated with S3, there is no need to move data to a separate database or data warehouse, saving on storage and data transfer costs.

Another benefit of using Athena for querying data in S3 is its scalability. It can quickly process large datasets in S3, making it suitable for analyzing big data. It also supports parallel processing, which allows for faster query execution and helps in maintaining performance even with growing datasets. Furthermore, Athena queries are SQL-based, so users do not need to learn a new query language or invest in additional tools or training. It also supports standard SQL functions and formats, making it easy to use for those familiar with SQL.

Setting up Athena

To set up Athena, follow these steps:

a. Log in to the AWS Management Console and navigate to the Athena service.

b. Click “Get Started” and follow the prompts to create a new Athena workspace.

c. Choose a name for your Athena workspace and select the S3 bucket where your query results will be stored.

d. Click “Create” to complete the setup process.

Configuring Permissions for Athena:

a. Create an Identity and Access Management (IAM) role that allows Athena to access your S3 bucket and any other external data sources you want to query.

b. Assign the IAM role to your Athena workspace in the Console under Settings > Permissions.

c. Grant appropriate permissions to the IAM role for your S3 bucket and other data sources.

Defining Database and Table Schemas in Athena:

Before you can start querying data in Athena, you must define the database and table schemas for your data. This can be done manually or by using AWS Glue.

a. Manually defining schemas:

i. In the Athena console, click on the “Database” tab and select “Create database” to define a new database.

ii. Give your database a name and click “Create.”

b. By using AWS Glue:

i. In the AWS Glue service console, create a crawler to scan your S3 bucket for data and automatically generate the table schema.

ii. Once the crawler has finished, your database and table will be created in Athena automatically.

Creating Tables in Athena:

a. In the Athena console, click on the “Database” tab and select the database you want to work with.

b. Click on the “Create table” button and choose to create a new table from scratch or use an existing table definition.

c. If creating a new table, provide a name for the table and select the location of the data in your S3 bucket.

d. Define the table columns, their data types, and any partition keys if applicable. e. Save the table to complete the process.

Querying Data in Athena:

a. In the Athena console, click on the “Query editor” tab.

b. Choose the database you want to work with and select the table you want to query.

c. Write your SQL query in the editor and click “Run query” to execute it.

d. The results will be displayed in the console, and you can save them to your S3 bucket if desired.

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